Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-1Q5R1I8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-1Q5R1I8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-1Q5R1I8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav3-1Q5R1I8 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.08□□□□□ -0.47
Trav3-1Q5R1I8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-1Q5R1I8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-1Q5R1I8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-1Q5R1I8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-1Q5R1I8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav3-1Q5R1I8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms