Protein–RNA interactions for Protein: Q3UMB9

Washc4, WASH complex subunit 4, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Washc4Q3UMB9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Washc4Q3UMB9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Washc4Q3UMB9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.3■■□□□ 1
Washc4Q3UMB9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Washc4Q3UMB9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.3■■□□□ 1
Washc4Q3UMB9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Washc4Q3UMB9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Washc4Q3UMB9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Washc4Q3UMB9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.29■■□□□ 1
Washc4Q3UMB9 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.29■■□□□ 1
Washc4Q3UMB9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Washc4Q3UMB9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Washc4Q3UMB9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Washc4Q3UMB9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Washc4Q3UMB9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Odf3b-204ENSMUST00000227834 930 ntBASIC21.28■■□□□ 1
Washc4Q3UMB9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Washc4Q3UMB9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.28■■□□□ 1
Washc4Q3UMB9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.27■■□□□ 1
Washc4Q3UMB9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Timm23-208ENSMUST00000226683 750 ntBASIC21.27■■□□□ 1
Washc4Q3UMB9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.27■■□□□ 1
Washc4Q3UMB9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Washc4Q3UMB9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Washc4Q3UMB9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Washc4Q3UMB9 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Washc4Q3UMB9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Washc4Q3UMB9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Washc4Q3UMB9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Washc4Q3UMB9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.24■□□□□ 0.99
Washc4Q3UMB9 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.24■□□□□ 0.99
Washc4Q3UMB9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Washc4Q3UMB9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Washc4Q3UMB9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms