Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smu1Q3UKJ7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smu1Q3UKJ7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.97■□□□□ 0.31
Smu1Q3UKJ7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Gm10849-201ENSMUST00000100397 618 ntBASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Gm2399-201ENSMUST00000104944 225 ntBASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Gm7291-201ENSMUST00000199147 382 ntBASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smu1Q3UKJ7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.96■□□□□ 0.3
Smu1Q3UKJ7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smu1Q3UKJ7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Gm6211-202ENSMUST00000167849 925 ntBASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Mir8112-201ENSMUST00000184382 131 ntBASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Gm29791-202ENSMUST00000207888 369 ntBASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smu1Q3UKJ7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smu1Q3UKJ7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms