Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim63Q38HM4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim63Q38HM4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim63Q38HM4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim63Q38HM4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.71□□□□□ -0.06
Trim63Q38HM4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim63Q38HM4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim63Q38HM4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim63Q38HM4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim63Q38HM4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim63Q38HM4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Gm8503-201ENSMUST00000118131 455 ntBASIC14.69□□□□□ -0.06
Trim63Q38HM4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim63Q38HM4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.68□□□□□ -0.06
Trim63Q38HM4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.68□□□□□ -0.06
Trim63Q38HM4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim63Q38HM4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim63Q38HM4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms