Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.1■□□□□ 0.33
Ptchd3Q0EEE2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.09■□□□□ 0.33
Ptchd3Q0EEE2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ptchd3Q0EEE2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ptchd3Q0EEE2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ptchd3Q0EEE2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Gm7514-201ENSMUST00000209475 934 ntBASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptchd3Q0EEE2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Gm26571-201ENSMUST00000181399 666 ntBASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 AV356131-201ENSMUST00000206201 750 ntBASIC17.05■□□□□ 0.32
Ptchd3Q0EEE2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms