Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.8■□□□□ 0.12
SgcbP82349 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SgcbP82349 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.8■□□□□ 0.12
SgcbP82349 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.8■□□□□ 0.12
SgcbP82349 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SgcbP82349 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SgcbP82349 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SgcbP82349 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SgcbP82349 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SgcbP82349 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.79■□□□□ 0.12
SgcbP82349 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.79■□□□□ 0.12
SgcbP82349 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SgcbP82349 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.79■□□□□ 0.12
SgcbP82349 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SgcbP82349 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SgcbP82349 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.78■□□□□ 0.12
SgcbP82349 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.78■□□□□ 0.12
SgcbP82349 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SgcbP82349 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.78■□□□□ 0.12
SgcbP82349 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcbP82349 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SgcbP82349 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcbP82349 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcbP82349 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcbP82349 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SgcbP82349 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SgcbP82349 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SgcbP82349 Gm10698-201ENSMUST00000182663 604 ntBASIC15.77■□□□□ 0.12
SgcbP82349 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.77■□□□□ 0.12
SgcbP82349 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.77■□□□□ 0.12
SgcbP82349 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.77■□□□□ 0.11
SgcbP82349 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SgcbP82349 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
SgcbP82349 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SgcbP82349 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.76■□□□□ 0.11
SgcbP82349 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
SgcbP82349 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.76■□□□□ 0.11
SgcbP82349 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.76■□□□□ 0.11
SgcbP82349 Gm42545-201ENSMUST00000202755 922 ntBASIC15.76■□□□□ 0.11
SgcbP82349 Gm18025-201ENSMUST00000221733 862 ntBASIC15.76■□□□□ 0.11
SgcbP82349 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SgcbP82349 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
SgcbP82349 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SgcbP82349 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
SgcbP82349 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcbP82349 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcbP82349 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcbP82349 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcbP82349 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.75■□□□□ 0.11
SgcbP82349 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SgcbP82349 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms