Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Frat1P70339 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Gm43137-201ENSMUST00000198052 594 ntBASIC19.25■□□□□ 0.67
Frat1P70339 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Frat1P70339 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.24■□□□□ 0.67
Frat1P70339 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Frat1P70339 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Frat1P70339 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.24■□□□□ 0.67
Frat1P70339 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Frat1P70339 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.23■□□□□ 0.67
Frat1P70339 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Frat1P70339 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.23■□□□□ 0.67
Frat1P70339 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.23■□□□□ 0.67
Frat1P70339 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Frat1P70339 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Frat1P70339 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Frat1P70339 Gm12922-201ENSMUST00000120626 809 ntBASIC19.22■□□□□ 0.67
Frat1P70339 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Frat1P70339 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Frat1P70339 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Frat1P70339 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Frat1P70339 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.21■□□□□ 0.67
Frat1P70339 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.21■□□□□ 0.67
Frat1P70339 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Frat1P70339 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Frat1P70339 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Frat1P70339 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.2■□□□□ 0.66
Frat1P70339 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Frat1P70339 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.2■□□□□ 0.66
Frat1P70339 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Frat1P70339 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Frat1P70339 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Frat1P70339 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Frat1P70339 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Frat1P70339 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Frat1P70339 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms