Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.56■□□□□ 0.4
Atxn1P54254 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atxn1P54254 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Atxn1P54254 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Atxn1P54254 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atxn1P54254 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atxn1P54254 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Atxn1P54254 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atxn1P54254 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.54■□□□□ 0.4
Atxn1P54254 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Gm25016-201ENSMUST00000158399 131 ntBASIC17.54■□□□□ 0.4
Atxn1P54254 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.54■□□□□ 0.4
Atxn1P54254 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atxn1P54254 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Atxn1P54254 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atxn1P54254 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Atxn1P54254 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Atxn1P54254 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.53■□□□□ 0.4
Atxn1P54254 Gm22697-201ENSMUST00000175194 63 ntBASIC17.53■□□□□ 0.4
Atxn1P54254 Gm28033-201ENSMUST00000184224 96 ntBASIC17.53■□□□□ 0.4
Atxn1P54254 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.53■□□□□ 0.4
Atxn1P54254 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.53■□□□□ 0.4
Atxn1P54254 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Atxn1P54254 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Atxn1P54254 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atxn1P54254 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.53■□□□□ 0.4
Atxn1P54254 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
Atxn1P54254 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.52■□□□□ 0.4
Atxn1P54254 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.52■□□□□ 0.4
Atxn1P54254 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atxn1P54254 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atxn1P54254 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Atxn1P54254 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Atxn1P54254 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atxn1P54254 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atxn1P54254 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.51■□□□□ 0.39
Atxn1P54254 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Atxn1P54254 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.51■□□□□ 0.39
Atxn1P54254 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.51■□□□□ 0.39
Atxn1P54254 Gm27463-201ENSMUST00000183569 57 ntBASIC17.51■□□□□ 0.39
Atxn1P54254 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.51■□□□□ 0.39
Atxn1P54254 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atxn1P54254 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms