Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lhx4P53776 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lhx4P53776 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lhx4P53776 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Lhx4P53776 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Lhx4P53776 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lhx4P53776 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lhx4P53776 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lhx4P53776 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.98□□□□□ -0.01
Lhx4P53776 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lhx4P53776 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.98□□□□□ -0.01
Lhx4P53776 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lhx4P53776 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Lhx4P53776 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lhx4P53776 Gm22325-201ENSMUST00000158904 308 ntBASIC14.97□□□□□ -0.01
Lhx4P53776 Gm20760-201ENSMUST00000179197 648 ntBASIC14.97□□□□□ -0.01
Lhx4P53776 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lhx4P53776 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lhx4P53776 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lhx4P53776 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Lhx4P53776 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lhx4P53776 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.96□□□□□ -0.01
Lhx4P53776 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lhx4P53776 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx4P53776 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lhx4P53776 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Lhx4P53776 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Lhx4P53776 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lhx4P53776 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.95□□□□□ -0.02
Lhx4P53776 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lhx4P53776 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Lhx4P53776 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Lhx4P53776 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lhx4P53776 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Lhx4P53776 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lhx4P53776 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Lhx4P53776 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lhx4P53776 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms