Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mir8112-201ENSMUST00000184382 131 ntBASIC16.25■□□□□ 0.19
Nkx2-2P42586 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Gm18025-201ENSMUST00000221733 862 ntBASIC16.25■□□□□ 0.19
Nkx2-2P42586 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.25■□□□□ 0.19
Nkx2-2P42586 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nkx2-2P42586 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.24■□□□□ 0.19
Nkx2-2P42586 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.24■□□□□ 0.19
Nkx2-2P42586 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nkx2-2P42586 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Gm5643-201ENSMUST00000117081 966 ntBASIC16.23■□□□□ 0.19
Nkx2-2P42586 Gm10653-202ENSMUST00000139570 835 ntBASIC16.23■□□□□ 0.19
Nkx2-2P42586 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.23■□□□□ 0.19
Nkx2-2P42586 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.23■□□□□ 0.19
Nkx2-2P42586 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nkx2-2P42586 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.22■□□□□ 0.19
Nkx2-2P42586 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nkx2-2P42586 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Gm6576-201ENSMUST00000169678 883 ntBASIC16.21■□□□□ 0.19
Nkx2-2P42586 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Gm20760-201ENSMUST00000179197 648 ntBASIC16.21■□□□□ 0.19
Nkx2-2P42586 Gm42545-201ENSMUST00000202755 922 ntBASIC16.21■□□□□ 0.19
Nkx2-2P42586 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nkx2-2P42586 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms