Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Foxa1P35582 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.38■□□□□ 0.21
Foxa1P35582 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.38■□□□□ 0.21
Foxa1P35582 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Foxa1P35582 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Foxa1P35582 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Rarb-207ENSMUST00000225921 2756 ntBASIC16.37■□□□□ 0.21
Foxa1P35582 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.37■□□□□ 0.21
Foxa1P35582 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Foxa1P35582 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.37■□□□□ 0.21
Foxa1P35582 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.37■□□□□ 0.21
Foxa1P35582 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Foxa1P35582 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Foxa1P35582 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.36■□□□□ 0.21
Foxa1P35582 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.36■□□□□ 0.21
Foxa1P35582 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
Foxa1P35582 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.36■□□□□ 0.21
Foxa1P35582 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Gm42545-201ENSMUST00000202755 922 ntBASIC16.36■□□□□ 0.21
Foxa1P35582 Gm29791-202ENSMUST00000207888 369 ntBASIC16.36■□□□□ 0.21
Foxa1P35582 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Foxa1P35582 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Foxa1P35582 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Foxa1P35582 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Foxa1P35582 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Foxa1P35582 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.35■□□□□ 0.21
Foxa1P35582 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Foxa1P35582 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.35■□□□□ 0.21
Foxa1P35582 Gm8520-201ENSMUST00000186517 868 ntBASIC16.35■□□□□ 0.21
Foxa1P35582 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.35■□□□□ 0.21
Foxa1P35582 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Foxa1P35582 Gm18025-201ENSMUST00000221733 862 ntBASIC16.35■□□□□ 0.21
Foxa1P35582 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.35■□□□□ 0.21
Foxa1P35582 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Foxa1P35582 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Foxa1P35582 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxa1P35582 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.34■□□□□ 0.21
Foxa1P35582 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.34■□□□□ 0.21
Foxa1P35582 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Foxa1P35582 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxa1P35582 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxa1P35582 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxa1P35582 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Foxa1P35582 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Foxa1P35582 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Foxa1P35582 Gm10418-201ENSMUST00000100943 576 ntBASIC16.33■□□□□ 0.2
Foxa1P35582 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Gm10698-201ENSMUST00000182663 604 ntBASIC16.33■□□□□ 0.2
Foxa1P35582 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.33■□□□□ 0.2
Foxa1P35582 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.33■□□□□ 0.2
Foxa1P35582 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxa1P35582 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms