Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.54■□□□□ 0.88
Pde6aP27664 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6aP27664 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
Pde6aP27664 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.53■□□□□ 0.88
Pde6aP27664 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.53■□□□□ 0.88
Pde6aP27664 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
Pde6aP27664 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.53■□□□□ 0.88
Pde6aP27664 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.53■□□□□ 0.88
Pde6aP27664 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6aP27664 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.52■□□□□ 0.88
Pde6aP27664 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Pde6aP27664 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Mir8112-201ENSMUST00000184382 131 ntBASIC20.52■□□□□ 0.88
Pde6aP27664 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.52■□□□□ 0.88
Pde6aP27664 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.52■□□□□ 0.88
Pde6aP27664 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6aP27664 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Pde6aP27664 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pde6aP27664 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pde6aP27664 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pde6aP27664 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Pde6aP27664 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.51■□□□□ 0.87
Pde6aP27664 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Mir1199-201ENSMUST00000117015 119 ntBASIC20.51■□□□□ 0.87
Pde6aP27664 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6aP27664 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.51■□□□□ 0.87
Pde6aP27664 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.5■□□□□ 0.87
Pde6aP27664 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.5■□□□□ 0.87
Pde6aP27664 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.5■□□□□ 0.87
Pde6aP27664 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.5■□□□□ 0.87
Pde6aP27664 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6aP27664 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.5■□□□□ 0.87
Pde6aP27664 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.49■□□□□ 0.87
Pde6aP27664 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pde6aP27664 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pde6aP27664 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.49■□□□□ 0.87
Pde6aP27664 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.49■□□□□ 0.87
Pde6aP27664 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6aP27664 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pde6aP27664 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6aP27664 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6aP27664 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6aP27664 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.48■□□□□ 0.87
Pde6aP27664 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.48■□□□□ 0.87
Pde6aP27664 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.48■□□□□ 0.87
Pde6aP27664 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.48■□□□□ 0.87
Pde6aP27664 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.48■□□□□ 0.87
Pde6aP27664 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pde6aP27664 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pde6aP27664 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pde6aP27664 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.47■□□□□ 0.87
Pde6aP27664 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6aP27664 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms