Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.39■□□□□ 0.37
Srp54P14576 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Srp54P14576 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srp54P14576 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.38■□□□□ 0.37
Srp54P14576 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Srp54P14576 Gm13836-201ENSMUST00000121159 501 ntBASIC17.38■□□□□ 0.37
Srp54P14576 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.38■□□□□ 0.37
Srp54P14576 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.38■□□□□ 0.37
Srp54P14576 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.38■□□□□ 0.37
Srp54P14576 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.38■□□□□ 0.37
Srp54P14576 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.38■□□□□ 0.37
Srp54P14576 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Srp54P14576 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Srp54P14576 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Srp54P14576 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.37■□□□□ 0.37
Srp54P14576 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srp54P14576 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Srp54P14576 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Srp54P14576 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Srp54P14576 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.36■□□□□ 0.37
Srp54P14576 Gm21814-202ENSMUST00000203277 873 ntBASIC17.36■□□□□ 0.37
Srp54P14576 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srp54P14576 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Srp54P14576 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.36■□□□□ 0.37
Srp54P14576 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srp54P14576 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srp54P14576 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
Srp54P14576 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Timm23-208ENSMUST00000226683 750 ntBASIC17.35■□□□□ 0.37
Srp54P14576 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Srp54P14576 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.35■□□□□ 0.37
Srp54P14576 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Srp54P14576 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srp54P14576 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Srp54P14576 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.34■□□□□ 0.37
Srp54P14576 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Srp54P14576 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srp54P14576 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srp54P14576 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srp54P14576 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Srp54P14576 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms