Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.83□□□□□ -0.03
Ercc1P07903 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ercc1P07903 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ercc1P07903 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ercc1P07903 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.83□□□□□ -0.04
Ercc1P07903 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ercc1P07903 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Ercc1P07903 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.83□□□□□ -0.04
Ercc1P07903 Gm43173-201ENSMUST00000202246 593 ntBASIC14.83□□□□□ -0.04
Ercc1P07903 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.83□□□□□ -0.04
Ercc1P07903 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ercc1P07903 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ercc1P07903 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ercc1P07903 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ercc1P07903 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ercc1P07903 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ercc1P07903 Gm43017-201ENSMUST00000198296 752 ntBASIC14.82□□□□□ -0.04
Ercc1P07903 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ercc1P07903 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.82□□□□□ -0.04
Ercc1P07903 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.82□□□□□ -0.04
Ercc1P07903 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc1P07903 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.82□□□□□ -0.04
Ercc1P07903 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.82□□□□□ -0.04
Ercc1P07903 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ercc1P07903 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.81□□□□□ -0.04
Ercc1P07903 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ercc1P07903 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.81□□□□□ -0.04
Ercc1P07903 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.81□□□□□ -0.04
Ercc1P07903 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ercc1P07903 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.81□□□□□ -0.04
Ercc1P07903 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc1P07903 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ercc1P07903 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ercc1P07903 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Ercc1P07903 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc1P07903 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.8□□□□□ -0.04
Ercc1P07903 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc1P07903 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Ercc1P07903 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ercc1P07903 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Ercc1P07903 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.79□□□□□ -0.04
Ercc1P07903 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms