Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm42642-201ENSMUST00000200683 355 ntBASIC14.35□□□□□ -0.11
P06323 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
P06323 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
P06323 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
P06323 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.35□□□□□ -0.11
P06323 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P06323 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06323 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.34□□□□□ -0.11
P06323 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.34□□□□□ -0.11
P06323 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
P06323 Gm10033-202ENSMUST00000211874 928 ntBASIC14.34□□□□□ -0.11
P06323 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
P06323 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Gm5874-201ENSMUST00000096101 508 ntBASIC14.34□□□□□ -0.11
P06323 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.34□□□□□ -0.11
P06323 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
P06323 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06323 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
P06323 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06323 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06323 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
P06323 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
P06323 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
P06323 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.33□□□□□ -0.12
P06323 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.33□□□□□ -0.12
P06323 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.33□□□□□ -0.12
P06323 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.33□□□□□ -0.12
P06323 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
P06323 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P06323 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06323 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06323 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.32□□□□□ -0.12
P06323 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06323 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
P06323 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.32□□□□□ -0.12
P06323 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.32□□□□□ -0.12
P06323 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06323 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.32□□□□□ -0.12
P06323 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06323 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P06323 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
P06323 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
P06323 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.31□□□□□ -0.12
P06323 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06323 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms