Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Col4a1P02463 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.9■■□□□ 1.1
Col4a1P02463 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Col4a1P02463 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Col4a1P02463 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Col4a1P02463 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Col4a1P02463 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a1P02463 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
Col4a1P02463 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a1P02463 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Col4a1P02463 Gm21559-201ENSMUST00000220638 855 ntBASIC21.89■■□□□ 1.1
Col4a1P02463 Gm8587-201ENSMUST00000076538 843 ntBASIC21.89■■□□□ 1.1
Col4a1P02463 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Col4a1P02463 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a1P02463 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a1P02463 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Col4a1P02463 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.89■■□□□ 1.09
Col4a1P02463 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.88■■□□□ 1.09
Col4a1P02463 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Col4a1P02463 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.88■■□□□ 1.09
Col4a1P02463 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.88■■□□□ 1.09
Col4a1P02463 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.88■■□□□ 1.09
Col4a1P02463 Gm29518-201ENSMUST00000190858 372 ntBASIC21.88■■□□□ 1.09
Col4a1P02463 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col4a1P02463 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.87■■□□□ 1.09
Col4a1P02463 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col4a1P02463 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Col4a1P02463 Gm37025-201ENSMUST00000195159 829 ntBASIC21.86■■□□□ 1.09
Col4a1P02463 Gm5587-201ENSMUST00000206270 674 ntBASIC21.86■■□□□ 1.09
Col4a1P02463 Gm7213-201ENSMUST00000215977 950 ntBASIC21.86■■□□□ 1.09
Col4a1P02463 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.86■■□□□ 1.09
Col4a1P02463 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col4a1P02463 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.85■■□□□ 1.09
Col4a1P02463 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Col4a1P02463 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.85■■□□□ 1.09
Col4a1P02463 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Col4a1P02463 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Col4a1P02463 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.85■■□□□ 1.09
Col4a1P02463 Mir8112-201ENSMUST00000184382 131 ntBASIC21.85■■□□□ 1.09
Col4a1P02463 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col4a1P02463 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.84■■□□□ 1.09
Col4a1P02463 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Gm28033-201ENSMUST00000184224 96 ntBASIC21.84■■□□□ 1.09
Col4a1P02463 Gm17808-201ENSMUST00000200859 894 ntBASIC21.84■■□□□ 1.09
Col4a1P02463 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col4a1P02463 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Col4a1P02463 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Col4a1P02463 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a1P02463 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col4a1P02463 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms