Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
TcraP01849 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TcraP01849 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TcraP01849 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.94□□□□□ -0.34
TcraP01849 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TcraP01849 Gm13241-201ENSMUST00000094493 780 ntBASIC12.94□□□□□ -0.34
TcraP01849 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TcraP01849 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TcraP01849 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TcraP01849 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TcraP01849 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.93□□□□□ -0.34
TcraP01849 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC12.93□□□□□ -0.34
TcraP01849 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.93□□□□□ -0.34
TcraP01849 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TcraP01849 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TcraP01849 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TcraP01849 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TcraP01849 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.93□□□□□ -0.34
TcraP01849 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TcraP01849 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.92□□□□□ -0.34
TcraP01849 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.92□□□□□ -0.34
TcraP01849 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.92□□□□□ -0.34
TcraP01849 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TcraP01849 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TcraP01849 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Gm43137-201ENSMUST00000198052 594 ntBASIC12.92□□□□□ -0.34
TcraP01849 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TcraP01849 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
TcraP01849 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TcraP01849 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TcraP01849 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TcraP01849 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TcraP01849 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
TcraP01849 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
TcraP01849 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.91□□□□□ -0.34
TcraP01849 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TcraP01849 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
TcraP01849 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms