Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igh-VJ558P01758 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Gm11643-201ENSMUST00000119578 864 ntBASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Gm20049-201ENSMUST00000219950 730 ntBASIC15.31■□□□□ 0.04
Igh-VJ558P01758 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.31■□□□□ 0.04
Igh-VJ558P01758 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igh-VJ558P01758 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm12441-201ENSMUST00000121806 588 ntBASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.3■□□□□ 0.04
Igh-VJ558P01758 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.3■□□□□ 0.04
Igh-VJ558P01758 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Gm27275-201ENSMUST00000184318 272 ntBASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.29■□□□□ 0.04
Igh-VJ558P01758 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igh-VJ558P01758 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igh-VJ558P01758 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Igh-VJ558P01758 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms