Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.3■□□□□ 0.52
CopeO89079 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CopeO89079 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CopeO89079 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CopeO89079 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CopeO89079 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
CopeO89079 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
CopeO89079 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.29■□□□□ 0.52
CopeO89079 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CopeO89079 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.28■□□□□ 0.52
CopeO89079 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CopeO89079 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.28■□□□□ 0.52
CopeO89079 Gm6420-201ENSMUST00000193885 723 ntBASIC18.28■□□□□ 0.52
CopeO89079 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CopeO89079 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.28■□□□□ 0.52
CopeO89079 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.28■□□□□ 0.52
CopeO89079 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.28■□□□□ 0.52
CopeO89079 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CopeO89079 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.27■□□□□ 0.52
CopeO89079 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CopeO89079 Gm42778-201ENSMUST00000199644 553 ntBASIC18.27■□□□□ 0.52
CopeO89079 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.27■□□□□ 0.52
CopeO89079 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CopeO89079 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CopeO89079 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.27■□□□□ 0.51
CopeO89079 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CopeO89079 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CopeO89079 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CopeO89079 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CopeO89079 Nespas-201ENSMUST00000143738 1083 ntBASIC18.26■□□□□ 0.51
CopeO89079 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CopeO89079 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CopeO89079 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.26■□□□□ 0.51
CopeO89079 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CopeO89079 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CopeO89079 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CopeO89079 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.25■□□□□ 0.51
CopeO89079 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CopeO89079 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CopeO89079 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CopeO89079 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CopeO89079 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.25■□□□□ 0.51
CopeO89079 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms