Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.36■□□□□ 0.21
Capns1O88456 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.36■□□□□ 0.21
Capns1O88456 Haglr-201ENSMUST00000100000 2085 ntBASIC16.36■□□□□ 0.21
Capns1O88456 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.36■□□□□ 0.21
Capns1O88456 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Capns1O88456 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Capns1O88456 Tgds-204ENSMUST00000228543 1594 ntBASIC16.35■□□□□ 0.21
Capns1O88456 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Gm38205-201ENSMUST00000192243 258 ntBASIC16.35■□□□□ 0.21
Capns1O88456 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.35■□□□□ 0.21
Capns1O88456 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Capns1O88456 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.34■□□□□ 0.21
Capns1O88456 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Capns1O88456 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.34■□□□□ 0.21
Capns1O88456 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.34■□□□□ 0.21
Capns1O88456 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Gm10252-201ENSMUST00000209541 832 ntBASIC16.34■□□□□ 0.21
Capns1O88456 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Capns1O88456 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.34■□□□□ 0.21
Capns1O88456 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Capns1O88456 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Capns1O88456 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Capns1O88456 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Capns1O88456 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Capns1O88456 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Capns1O88456 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Capns1O88456 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Capns1O88456 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Capns1O88456 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Capns1O88456 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.33■□□□□ 0.2
Capns1O88456 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Capns1O88456 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.32■□□□□ 0.2
Capns1O88456 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.32■□□□□ 0.2
Capns1O88456 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.32■□□□□ 0.2
Capns1O88456 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.32■□□□□ 0.2
Capns1O88456 Gm22240-201ENSMUST00000175225 82 ntBASIC16.32■□□□□ 0.2
Capns1O88456 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.32■□□□□ 0.2
Capns1O88456 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.32■□□□□ 0.2
Capns1O88456 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Capns1O88456 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Capns1O88456 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Capns1O88456 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Capns1O88456 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms