Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.27■□□□□ 0.35
Cacna1hO88427 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cacna1hO88427 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1hO88427 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.26■□□□□ 0.35
Cacna1hO88427 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1hO88427 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cacna1hO88427 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.25■□□□□ 0.35
Cacna1hO88427 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cacna1hO88427 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
Cacna1hO88427 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Gm15372-201ENSMUST00000120729 834 ntBASIC17.24■□□□□ 0.35
Cacna1hO88427 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.24■□□□□ 0.35
Cacna1hO88427 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.24■□□□□ 0.35
Cacna1hO88427 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cacna1hO88427 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cacna1hO88427 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cacna1hO88427 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cacna1hO88427 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44357-201ENSMUST00000195897 142 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm19658-201ENSMUST00000196231 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44367-201ENSMUST00000196836 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44350-201ENSMUST00000197197 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44390-201ENSMUST00000197533 144 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44313-201ENSMUST00000198018 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44486-201ENSMUST00000198508 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44454-201ENSMUST00000198541 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44314-201ENSMUST00000199263 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44394-201ENSMUST00000199558 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44484-201ENSMUST00000199873 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44466-201ENSMUST00000200264 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Gm44359-201ENSMUST00000200671 138 ntBASIC17.23■□□□□ 0.35
Cacna1hO88427 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cacna1hO88427 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.22■□□□□ 0.35
Cacna1hO88427 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.22■□□□□ 0.35
Cacna1hO88427 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cacna1hO88427 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms