Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.61■□□□□ 0.41
Ldb2O55203 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.61■□□□□ 0.41
Ldb2O55203 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.61■□□□□ 0.41
Ldb2O55203 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.61■□□□□ 0.41
Ldb2O55203 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ldb2O55203 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Ldb2O55203 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.61■□□□□ 0.41
Ldb2O55203 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Gm10653-202ENSMUST00000139570 835 ntBASIC17.6■□□□□ 0.41
Ldb2O55203 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.6■□□□□ 0.41
Ldb2O55203 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.6■□□□□ 0.41
Ldb2O55203 Gm8969-201ENSMUST00000199694 526 ntBASIC17.6■□□□□ 0.41
Ldb2O55203 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ldb2O55203 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.6■□□□□ 0.41
Ldb2O55203 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ldb2O55203 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ldb2O55203 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Ldb2O55203 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.59■□□□□ 0.41
Ldb2O55203 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ldb2O55203 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.59■□□□□ 0.41
Ldb2O55203 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Gm13401-201ENSMUST00000117074 291 ntBASIC17.59■□□□□ 0.41
Ldb2O55203 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ldb2O55203 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Ldb2O55203 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ldb2O55203 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ldb2O55203 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ldb2O55203 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ldb2O55203 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ldb2O55203 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ldb2O55203 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Gm11643-201ENSMUST00000119578 864 ntBASIC17.58■□□□□ 0.4
Ldb2O55203 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.58■□□□□ 0.4
Ldb2O55203 Gm18666-201ENSMUST00000190039 958 ntBASIC17.58■□□□□ 0.4
Ldb2O55203 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ldb2O55203 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ldb2O55203 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.58■□□□□ 0.4
Ldb2O55203 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ldb2O55203 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.57■□□□□ 0.4
Ldb2O55203 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ldb2O55203 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.57■□□□□ 0.4
Ldb2O55203 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ldb2O55203 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ldb2O55203 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.56■□□□□ 0.4
Ldb2O55203 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ldb2O55203 Gm5643-201ENSMUST00000117081 966 ntBASIC17.56■□□□□ 0.4
Ldb2O55203 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms