Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Phox2bO35690 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.69■□□□□ 0.42
Phox2bO35690 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Phox2bO35690 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Mir3081-201ENSMUST00000175305 84 ntBASIC17.69■□□□□ 0.42
Phox2bO35690 Gm28659-201ENSMUST00000188013 759 ntBASIC17.69■□□□□ 0.42
Phox2bO35690 Gm5864-201ENSMUST00000202263 970 ntBASIC17.69■□□□□ 0.42
Phox2bO35690 Gm34391-201ENSMUST00000203706 907 ntBASIC17.69■□□□□ 0.42
Phox2bO35690 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.69■□□□□ 0.42
Phox2bO35690 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Phox2bO35690 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Phox2bO35690 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
Phox2bO35690 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Phox2bO35690 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Phox2bO35690 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Phox2bO35690 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Phox2bO35690 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Phox2bO35690 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.68■□□□□ 0.42
Phox2bO35690 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.68■□□□□ 0.42
Phox2bO35690 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Phox2bO35690 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Phox2bO35690 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Phox2bO35690 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.67■□□□□ 0.42
Phox2bO35690 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Phox2bO35690 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Phox2bO35690 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.67■□□□□ 0.42
Phox2bO35690 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.67■□□□□ 0.42
Phox2bO35690 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Phox2bO35690 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Phox2bO35690 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Phox2bO35690 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Phox2bO35690 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Phox2bO35690 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.66■□□□□ 0.42
Phox2bO35690 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.66■□□□□ 0.42
Phox2bO35690 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.66■□□□□ 0.42
Phox2bO35690 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.66■□□□□ 0.42
Phox2bO35690 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Phox2bO35690 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Phox2bO35690 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.65■□□□□ 0.42
Phox2bO35690 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.65■□□□□ 0.42
Phox2bO35690 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.65■□□□□ 0.42
Phox2bO35690 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.65■□□□□ 0.42
Phox2bO35690 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Phox2bO35690 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.65■□□□□ 0.42
Phox2bO35690 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.65■□□□□ 0.42
Phox2bO35690 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Phox2bO35690 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms