Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.26■□□□□ 0.35
Npc1O35604 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.26■□□□□ 0.35
Npc1O35604 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Npc1O35604 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Npc1O35604 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Npc1O35604 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.25■□□□□ 0.35
Npc1O35604 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.25■□□□□ 0.35
Npc1O35604 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Npc1O35604 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Mtag2-201ENSMUST00000058665 714 ntBASIC17.25■□□□□ 0.35
Npc1O35604 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.25■□□□□ 0.35
Npc1O35604 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.25■□□□□ 0.35
Npc1O35604 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Npc1O35604 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Npc1O35604 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Npc1O35604 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.24■□□□□ 0.35
Npc1O35604 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.24■□□□□ 0.35
Npc1O35604 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Npc1O35604 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.24■□□□□ 0.35
Npc1O35604 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Npc1O35604 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
Npc1O35604 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.23■□□□□ 0.35
Npc1O35604 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Npc1O35604 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Npc1O35604 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.22■□□□□ 0.35
Npc1O35604 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.22■□□□□ 0.35
Npc1O35604 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Mir1199-201ENSMUST00000117015 119 ntBASIC17.22■□□□□ 0.35
Npc1O35604 Gm18025-201ENSMUST00000221733 862 ntBASIC17.22■□□□□ 0.35
Npc1O35604 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Npc1O35604 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.22■□□□□ 0.35
Npc1O35604 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.22■□□□□ 0.35
Npc1O35604 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Npc1O35604 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Npc1O35604 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Npc1O35604 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Npc1O35604 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Npc1O35604 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.21■□□□□ 0.35
Npc1O35604 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Npc1O35604 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.21■□□□□ 0.35
Npc1O35604 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Npc1O35604 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Npc1O35604 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Npc1O35604 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Npc1O35604 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Npc1O35604 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms