Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cpsf2O35218 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Gm7291-201ENSMUST00000199147 382 ntBASIC18.91■□□□□ 0.62
Cpsf2O35218 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.91■□□□□ 0.62
Cpsf2O35218 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Cpsf2O35218 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf2O35218 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf2O35218 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cpsf2O35218 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Idnk-204ENSMUST00000226010 1898 ntBASIC18.9■□□□□ 0.62
Cpsf2O35218 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf2O35218 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpsf2O35218 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpsf2O35218 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cpsf2O35218 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Cpsf2O35218 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cpsf2O35218 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cpsf2O35218 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.89■□□□□ 0.61
Cpsf2O35218 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf2O35218 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Gm18284-201ENSMUST00000172604 624 ntBASIC18.88■□□□□ 0.61
Cpsf2O35218 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.88■□□□□ 0.61
Cpsf2O35218 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf2O35218 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.88■□□□□ 0.61
Cpsf2O35218 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf2O35218 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.87■□□□□ 0.61
Cpsf2O35218 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Gm10849-201ENSMUST00000100397 618 ntBASIC18.87■□□□□ 0.61
Cpsf2O35218 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
Cpsf2O35218 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.87■□□□□ 0.61
Cpsf2O35218 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.87■□□□□ 0.61
Cpsf2O35218 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf2O35218 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf2O35218 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms