Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Fst-202ENSMUST00000223640 2612 ntBASIC15.29■□□□□ 0.04
Gfra3O35118 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.29■□□□□ 0.04
Gfra3O35118 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.29■□□□□ 0.04
Gfra3O35118 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gfra3O35118 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Gfra3O35118 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gfra3O35118 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gfra3O35118 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gfra3O35118 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gfra3O35118 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Mir5122-201ENSMUST00000175004 89 ntBASIC15.27■□□□□ 0.04
Gfra3O35118 Gm37055-201ENSMUST00000191866 133 ntBASIC15.27■□□□□ 0.04
Gfra3O35118 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gfra3O35118 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Gfra3O35118 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gfra3O35118 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gfra3O35118 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gfra3O35118 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.27■□□□□ 0.03
Gfra3O35118 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gfra3O35118 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gfra3O35118 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Gfra3O35118 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.27■□□□□ 0.03
Gfra3O35118 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gfra3O35118 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gfra3O35118 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.26■□□□□ 0.03
Gfra3O35118 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.26■□□□□ 0.03
Gfra3O35118 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.26■□□□□ 0.03
Gfra3O35118 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.26■□□□□ 0.03
Gfra3O35118 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.26■□□□□ 0.03
Gfra3O35118 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gfra3O35118 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gfra3O35118 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gfra3O35118 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Gfra3O35118 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gfra3O35118 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.25■□□□□ 0.03
Gfra3O35118 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Gfra3O35118 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gfra3O35118 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
Gfra3O35118 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gfra3O35118 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gfra3O35118 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gfra3O35118 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms