Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TprF6ZDS4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.22■□□□□ 0.19
TprF6ZDS4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.22■□□□□ 0.19
TprF6ZDS4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TprF6ZDS4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TprF6ZDS4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TprF6ZDS4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.21■□□□□ 0.19
TprF6ZDS4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TprF6ZDS4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.21■□□□□ 0.19
TprF6ZDS4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TprF6ZDS4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TprF6ZDS4 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.21■□□□□ 0.19
TprF6ZDS4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TprF6ZDS4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TprF6ZDS4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TprF6ZDS4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.21■□□□□ 0.18
TprF6ZDS4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TprF6ZDS4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TprF6ZDS4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TprF6ZDS4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
TprF6ZDS4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.2■□□□□ 0.18
TprF6ZDS4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TprF6ZDS4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TprF6ZDS4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.2■□□□□ 0.18
TprF6ZDS4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TprF6ZDS4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TprF6ZDS4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Gm5186-201ENSMUST00000218781 920 ntBASIC16.19■□□□□ 0.18
TprF6ZDS4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TprF6ZDS4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.19■□□□□ 0.18
TprF6ZDS4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TprF6ZDS4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
TprF6ZDS4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.19■□□□□ 0.18
TprF6ZDS4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TprF6ZDS4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Gm24589-201ENSMUST00000116692 94 ntBASIC16.18■□□□□ 0.18
TprF6ZDS4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TprF6ZDS4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.18■□□□□ 0.18
TprF6ZDS4 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.17■□□□□ 0.18
TprF6ZDS4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TprF6ZDS4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Grk6-206ENSMUST00000224995 2971 ntBASIC16.17■□□□□ 0.18
TprF6ZDS4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TprF6ZDS4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TprF6ZDS4 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.16■□□□□ 0.18
TprF6ZDS4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms