Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm37194-201ENSMUST00000193092 3031 ntBASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igkv1-88A0A140T8N1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm45417-201ENSMUST00000209533 758 ntBASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm9988-201ENSMUST00000069786 435 ntBASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Igkv1-88A0A140T8N1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm6139-201ENSMUST00000079261 882 ntBASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Igkv1-88A0A140T8N1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Igkv1-88A0A140T8N1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Igkv1-88A0A140T8N1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Igkv1-88A0A140T8N1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms