Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cfap99A0A140LIX9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap99A0A140LIX9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cfap99A0A140LIX9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Gm21814-202ENSMUST00000203277 873 ntBASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Gm30025-201ENSMUST00000218555 728 ntBASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cfap99A0A140LIX9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.14■□□□□ 0.98
Cfap99A0A140LIX9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap99A0A140LIX9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cfap99A0A140LIX9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cfap99A0A140LIX9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cfap99A0A140LIX9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Cfap99A0A140LIX9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cfap99A0A140LIX9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cfap99A0A140LIX9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gm15375-201ENSMUST00000119510 849 ntBASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gm18025-201ENSMUST00000221733 862 ntBASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cfap99A0A140LIX9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cfap99A0A140LIX9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms