Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv8-27A0A0G2JF28 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Igkv8-27A0A0G2JF28 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-27A0A0G2JF28 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-27A0A0G2JF28 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv8-27A0A0G2JF28 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv8-27A0A0G2JF28 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm13238-201ENSMUST00000117655 780 ntBASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Igkv8-27A0A0G2JF28 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm8770-201ENSMUST00000121113 1109 ntBASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.12□□□□□ -0.63
Igkv8-27A0A0G2JF28 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Gm7860-201ENSMUST00000121190 879 ntBASIC11.11□□□□□ -0.63
Igkv8-27A0A0G2JF28 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms