Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-3A0A075B695 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9d-3A0A075B695 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9d-3A0A075B695 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Mir5133-201ENSMUST00000174955 77 ntBASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav9d-3A0A075B695 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9d-3A0A075B695 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav9d-3A0A075B695 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav9d-3A0A075B695 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms