Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav14n-3A0A075B645 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav14n-3A0A075B645 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Idnk-204ENSMUST00000226010 1898 ntBASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Gm27801-201ENSMUST00000184174 223 ntBASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav14n-3A0A075B645 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Golgb1-201ENSMUST00000023534 498 ntBASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav14n-3A0A075B645 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav14n-3A0A075B645 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms