Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Gm5408-201ENSMUST00000197998 747 ntBASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav6-7-dv9A0A075B639 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-7-dv9A0A075B639 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.71■□□□□ 0.1
Trav6-7-dv9A0A075B639 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav6-7-dv9A0A075B639 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm29791-202ENSMUST00000207888 369 ntBASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-7-dv9A0A075B639 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-7-dv9A0A075B639 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Gm15039-201ENSMUST00000118914 875 ntBASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-7-dv9A0A075B639 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms