Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav4d-3A0A075B625 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav4d-3A0A075B625 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav4d-3A0A075B625 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Gm13216-201ENSMUST00000117145 591 ntBASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav4d-3A0A075B625 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav4d-3A0A075B625 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms