Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-6A0A075B603 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-6A0A075B603 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-6A0A075B603 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav6-6A0A075B603 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-6A0A075B603 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-6A0A075B603 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-6A0A075B603 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Gm38205-201ENSMUST00000192243 258 ntBASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-6A0A075B603 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-6A0A075B603 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6-6A0A075B603 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms