Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm23839-201ENSMUST00000116957 109 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm13681-201ENSMUST00000117925 210 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm3216-201ENSMUST00000166927 486 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm3141-201ENSMUST00000168726 499 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm27148-201ENSMUST00000185086 160 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Mir703-201ENSMUST00000197105 109 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm19253-201ENSMUST00000204279 307 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm43992-201ENSMUST00000204358 197 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm6828-201ENSMUST00000207902 1186 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm8911-201ENSMUST00000213986 652 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm40692-201ENSMUST00000220411 491 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Vps53Q8CCB4 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm44695-201ENSMUST00000205567 1631 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Zfp389-201ENSMUST00000118425 675 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm14769-201ENSMUST00000118590 432 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm13678-201ENSMUST00000118926 340 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm14175-201ENSMUST00000119835 241 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm15490-201ENSMUST00000119894 387 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm12885-201ENSMUST00000122246 328 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm23069-201ENSMUST00000158240 311 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm22698-201ENSMUST00000175375 108 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm22355-201ENSMUST00000175531 96 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm27855-201ENSMUST00000184122 128 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm44395-201ENSMUST00000197056 153 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm17984-201ENSMUST00000205286 859 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm19196-201ENSMUST00000209258 357 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm45636-201ENSMUST00000210497 1064 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm18904-201ENSMUST00000218756 329 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 AC164567.4-201ENSMUST00000219708 483 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Snora30-201ENSMUST00000083325 130 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Gm13961-201ENSMUST00000119282 4772 ntBASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Vps53Q8CCB4 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Mir193b-201ENSMUST00000103784 79 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm11699-201ENSMUST00000119016 401 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm15361-201ENSMUST00000119320 444 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm12267-201ENSMUST00000121609 761 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Gm11910-201ENSMUST00000121624 432 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.29□□□□□ -1.4
Vps53Q8CCB4 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms