Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm9057-201ENSMUST00000198791 296 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm18924-201ENSMUST00000211929 316 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm20368-201ENSMUST00000220716 301 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm10705-201ENSMUST00000098980 461 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm29084-201ENSMUST00000185587 1452 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Upf3bQ3ULL6 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm14711-201ENSMUST00000117056 217 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 H3f3c-201ENSMUST00000119459 411 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm23537-201ENSMUST00000157536 330 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm23965-201ENSMUST00000157969 142 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Igkv3-8-201ENSMUST00000197635 339 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm43408-201ENSMUST00000198263 440 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm32453-201ENSMUST00000204183 456 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Gm10933-201ENSMUST00000221891 1861 ntBASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Upf3bQ3ULL6 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm15772-201ENSMUST00000118533 438 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm13738-201ENSMUST00000122437 469 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Olfr331-202ENSMUST00000170501 957 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm16456-201ENSMUST00000174431 920 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm26318-201ENSMUST00000176507 96 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm6717-201ENSMUST00000185549 838 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm9442-201ENSMUST00000194242 319 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm18482-201ENSMUST00000202405 760 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm2011-203ENSMUST00000203750 435 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm40692-201ENSMUST00000220411 491 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Upf3bQ3ULL6 AC131586.2-202ENSMUST00000227016 2705 ntBASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.4□□□□□ -1.55
Upf3bQ3ULL6 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms