Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Cdx2P43241 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Cdx2P43241 Gm37370-201ENSMUST00000191996 1410 ntBASIC4.9□□□□□ -1.62
Cdx2P43241 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Cdx2P43241 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Cdx2P43241 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Cdx2P43241 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Cdx2P43241 Gm14995-201ENSMUST00000117135 391 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm12285-201ENSMUST00000117347 233 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm11633-201ENSMUST00000118176 444 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Magea9-ps-201ENSMUST00000140655 732 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.9□□□□□ -1.63
Cdx2P43241 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.9□□□□□ -1.63
Cdx2P43241 Magea9-ps-202ENSMUST00000167328 899 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm17081-201ENSMUST00000167363 478 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Mir6416-201ENSMUST00000183664 117 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm4412-201ENSMUST00000186660 433 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm29489-201ENSMUST00000188934 324 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm37503-201ENSMUST00000192088 319 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm17999-201ENSMUST00000211568 542 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Cdx2P43241 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Gm18186-201ENSMUST00000192239 1580 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.9□□□□□ -1.63
Cdx2P43241 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Cdx2P43241 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Cdx2P43241 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm23294-201ENSMUST00000104150 164 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm25419-201ENSMUST00000104215 191 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm15357-201ENSMUST00000119160 285 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm12281-201ENSMUST00000119536 298 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm11790-201ENSMUST00000119569 455 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm15168-201ENSMUST00000121057 316 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm25348-201ENSMUST00000158961 111 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm5558-201ENSMUST00000178933 495 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm6717-201ENSMUST00000185549 838 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm21654-201ENSMUST00000188086 691 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm28957-201ENSMUST00000190174 373 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm38046-201ENSMUST00000192733 550 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm38185-201ENSMUST00000193195 694 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm19096-201ENSMUST00000209705 766 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm7128-201ENSMUST00000211639 533 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx2P43241 AC166323.1-201ENSMUST00000217756 367 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm7045-201ENSMUST00000221466 605 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx2P43241 Gm23927-201ENSMUST00000082466 215 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Gm25260-201ENSMUST00000083053 134 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Cdx2P43241 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Cdx2P43241 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Cdx2P43241 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx2P43241 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.89□□□□□ -1.63
Cdx2P43241 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms