Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Gm43039-201ENSMUST00000202883 963 ntBASIC5.11□□□□□ -1.59
HttP42859 Gm2522-201ENSMUST00000204280 322 ntBASIC5.11□□□□□ -1.59
HttP42859 Gm45523-201ENSMUST00000210712 799 ntBASIC5.11□□□□□ -1.59
HttP42859 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.11□□□□□ -1.59
HttP42859 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.11□□□□□ -1.59
HttP42859 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.11□□□□□ -1.59
HttP42859 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.11□□□□□ -1.59
HttP42859 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
HttP42859 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.11□□□□□ -1.59
HttP42859 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.11□□□□□ -1.59
HttP42859 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HttP42859 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.11□□□□□ -1.59
HttP42859 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HttP42859 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
HttP42859 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.11□□□□□ -1.59
HttP42859 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HttP42859 Gm25764-201ENSMUST00000104092 134 ntBASIC5.1□□□□□ -1.59
HttP42859 Snora64-201ENSMUST00000104521 134 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm9043-201ENSMUST00000119677 314 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm42566-201ENSMUST00000197120 643 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm11360-201ENSMUST00000221898 262 ntBASIC5.1□□□□□ -1.59
HttP42859 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HttP42859 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.1□□□□□ -1.59
HttP42859 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.1□□□□□ -1.59
HttP42859 Gm14621-201ENSMUST00000117709 689 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm12340-201ENSMUST00000121617 462 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm22940-201ENSMUST00000158560 155 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm8790-201ENSMUST00000194108 322 ntBASIC5.1□□□□□ -1.59
HttP42859 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HttP42859 Mir132-201ENSMUST00000083603 66 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HttP42859 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC5.1□□□□□ -1.59
HttP42859 Gm38218-201ENSMUST00000193555 4689 ntBASIC5.1□□□□□ -1.59
HttP42859 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Gm18259-201ENSMUST00000220991 2010 ntBASIC5.1□□□□□ -1.59
HttP42859 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.1□□□□□ -1.59
HttP42859 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC5.1□□□□□ -1.59
HttP42859 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC5.1□□□□□ -1.59
HttP42859 Gm25999-201ENSMUST00000175398 133 ntBASIC5.1□□□□□ -1.59
HttP42859 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.1□□□□□ -1.59
HttP42859 Gm37243-201ENSMUST00000193407 595 ntBASIC5.1□□□□□ -1.59
HttP42859 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HttP42859 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.1□□□□□ -1.59
HttP42859 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HttP42859 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.09□□□□□ -1.59
HttP42859 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HttP42859 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.09□□□□□ -1.59
HttP42859 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HttP42859 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.09□□□□□ -1.59
HttP42859 Gm28314-201ENSMUST00000191276 345 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms