Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm12820-201ENSMUST00000119233 342 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm14046-201ENSMUST00000119389 509 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm7335-201ENSMUST00000172475 373 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Mir7012-201ENSMUST00000183900 64 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm19095-201ENSMUST00000220533 730 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm6049-201ENSMUST00000222369 458 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Gm45222-201ENSMUST00000207029 4307 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Atg4aQ8C9S8 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm25919-201ENSMUST00000104271 132 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm22343-201ENSMUST00000122648 286 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Mir7235-201ENSMUST00000183796 56 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm8480-201ENSMUST00000190350 698 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm37659-201ENSMUST00000194574 111 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm18011-201ENSMUST00000203717 565 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm7822-201ENSMUST00000222433 581 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm4963-201ENSMUST00000072718 378 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Atg4aQ8C9S8 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm37726-201ENSMUST00000193246 3886 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm15981-201ENSMUST00000119196 457 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm12752-201ENSMUST00000121657 811 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm16259-201ENSMUST00000145241 553 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm27543-201ENSMUST00000183562 177 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm17981-201ENSMUST00000191109 739 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm43136-201ENSMUST00000200403 636 ntBASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.06□□□□□ -1.44
Atg4aQ8C9S8 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms