Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Scn1bP97952 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.9□□□□□ -1.63
Scn1bP97952 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.9□□□□□ -1.63
Scn1bP97952 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.9□□□□□ -1.63
Scn1bP97952 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn1bP97952 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Scn1bP97952 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Akr1e1-201ENSMUST00000091848 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn1bP97952 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm12392-201ENSMUST00000118014 938 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm15660-201ENSMUST00000118997 478 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm14472-201ENSMUST00000119815 282 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm15877-201ENSMUST00000121897 964 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC4.89□□□□□ -1.63
Scn1bP97952 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 1700123O12Rik-204ENSMUST00000146783 577 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm25227-201ENSMUST00000158204 112 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm24733-201ENSMUST00000158863 253 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm16164-201ENSMUST00000160078 468 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm20778-201ENSMUST00000178524 627 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm6717-201ENSMUST00000185549 838 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Mrgpra14-201ENSMUST00000189782 913 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm37430-201ENSMUST00000193039 196 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm37193-201ENSMUST00000193087 513 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 AC099760.1-201ENSMUST00000196300 153 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm5990-201ENSMUST00000203126 746 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC4.89□□□□□ -1.63
Scn1bP97952 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm23302-201ENSMUST00000082710 100 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 n-R5s161-201ENSMUST00000083728 114 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm43426-201ENSMUST00000197287 2597 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Scn1bP97952 Gm19035-201ENSMUST00000193299 1742 ntBASIC4.89□□□□□ -1.63
Scn1bP97952 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn1bP97952 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm43745-201ENSMUST00000198085 1883 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25647-201ENSMUST00000101832 78 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25823-201ENSMUST00000101995 78 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC4.88□□□□□ -1.63
Scn1bP97952 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm7658-201ENSMUST00000119064 1124 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm14623-201ENSMUST00000121398 603 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm14589-201ENSMUST00000121640 727 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm12618-201ENSMUST00000121754 483 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm7973-201ENSMUST00000122107 488 ntBASIC4.88□□□□□ -1.63
Scn1bP97952 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC4.88□□□□□ -1.63
Scn1bP97952 Gm25117-201ENSMUST00000157194 144 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms