Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm9134-201ENSMUST00000193186 551 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Foxa1P35582 Gm29781-201ENSMUST00000203862 478 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.72□□□□□ -1.65
Foxa1P35582 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC4.72□□□□□ -1.65
Foxa1P35582 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Foxa1P35582 Gm19256-201ENSMUST00000218550 231 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Foxa1P35582 Gm4963-201ENSMUST00000072718 378 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Foxa1P35582 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.72□□□□□ -1.65
Foxa1P35582 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Foxa1P35582 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Foxa1P35582 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Foxa1P35582 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.72□□□□□ -1.65
Foxa1P35582 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Foxa1P35582 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Foxa1P35582 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Foxa1P35582 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.71□□□□□ -1.65
Foxa1P35582 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Foxa1P35582 Gm42686-201ENSMUST00000199172 4108 ntBASIC4.71□□□□□ -1.65
Foxa1P35582 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Foxa1P35582 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Foxa1P35582 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.71□□□□□ -1.65
Foxa1P35582 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.71□□□□□ -1.66
Foxa1P35582 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Mir1188-201ENSMUST00000116756 120 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm2199-201ENSMUST00000119065 874 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm20545-201ENSMUST00000174739 210 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm29664-201ENSMUST00000191125 463 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm37436-201ENSMUST00000193842 1085 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm18924-201ENSMUST00000211929 316 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Olfr151-202ENSMUST00000221099 929 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Zfp429-203ENSMUST00000224684 524 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Foxa1P35582 CT030238.1-201ENSMUST00000228393 442 ntBASIC4.71□□□□□ -1.66
Foxa1P35582 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Foxa1P35582 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Foxa1P35582 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.71□□□□□ -1.66
Foxa1P35582 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Foxa1P35582 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Foxa1P35582 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Foxa1P35582 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm25418-201ENSMUST00000104214 129 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Foxa1P35582 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm11550-201ENSMUST00000118210 699 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm15828-201ENSMUST00000119911 522 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm15034-201ENSMUST00000120043 349 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm14603-201ENSMUST00000121275 448 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Foxa1P35582 Gm22725-201ENSMUST00000158092 110 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm21999-201ENSMUST00000165985 387 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm17046-201ENSMUST00000168078 850 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm27266-201ENSMUST00000184521 123 ntBASIC4.7□□□□□ -1.66
Foxa1P35582 Gm27818-201ENSMUST00000184536 159 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms