Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm23593-201ENSMUST00000104309 120 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm14303-201ENSMUST00000121320 171 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm25977-201ENSMUST00000158697 85 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm7822-201ENSMUST00000222433 581 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col6a3E9PWQ3 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm25564-201ENSMUST00000104604 132 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm6009-201ENSMUST00000210848 280 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm7853-201ENSMUST00000100708 478 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm5284-201ENSMUST00000199053 903 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm11925-201ENSMUST00000121375 535 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm25386-201ENSMUST00000157814 288 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm32447-201ENSMUST00000194265 697 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm43611-201ENSMUST00000196656 4352 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Snora64-201ENSMUST00000104521 134 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm14606-201ENSMUST00000117078 1155 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm6673-201ENSMUST00000166114 700 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm27818-201ENSMUST00000184536 159 ntBASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col6a3E9PWQ3 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms