Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm19186-201ENSMUST00000219922 333 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Col1a1P11087 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Gm43843-201ENSMUST00000202396 1587 ntBASIC5.98□□□□□ -1.45
Col1a1P11087 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col1a1P11087 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col1a1P11087 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Col1a1P11087 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm23594-201ENSMUST00000104307 134 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm12112-201ENSMUST00000117772 231 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm16250-201ENSMUST00000148974 256 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm6632-201ENSMUST00000168425 954 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col1a1P11087 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm8993-201ENSMUST00000182182 983 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.97□□□□□ -1.45
Col1a1P11087 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm43136-201ENSMUST00000200403 636 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm8719-201ENSMUST00000203602 534 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm45209-201ENSMUST00000207122 353 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.97□□□□□ -1.45
Col1a1P11087 Desi2-202ENSMUST00000069568 1193 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.97□□□□□ -1.45
Col1a1P11087 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.97□□□□□ -1.45
Col1a1P11087 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.97□□□□□ -1.45
Col1a1P11087 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col1a1P11087 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.96□□□□□ -1.45
Col1a1P11087 Gm15333-201ENSMUST00000118825 364 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Gm23354-201ENSMUST00000158426 104 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Gm18128-201ENSMUST00000172625 511 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Gm27781-201ENSMUST00000185185 92 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Gm27564-201ENSMUST00000185196 96 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.96□□□□□ -1.45
Col1a1P11087 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.96□□□□□ -1.45
Col1a1P11087 Gm44134-202ENSMUST00000204777 545 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.96□□□□□ -1.45
Col1a1P11087 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col1a1P11087 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col1a1P11087 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Col1a1P11087 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col1a1P11087 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.96□□□□□ -1.45
Col1a1P11087 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col1a1P11087 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col1a1P11087 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col1a1P11087 AC124581.3-201ENSMUST00000224270 1624 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.96□□□□□ -1.46
Col1a1P11087 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Col1a1P11087 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col1a1P11087 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.96□□□□□ -1.46
Col1a1P11087 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.96□□□□□ -1.46
Col1a1P11087 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Col1a1P11087 Gm15227-201ENSMUST00000121844 399 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms