Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC6.06□□□□□ -1.44
Nkx6-1Q99MA9 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm45415-201ENSMUST00000209644 2074 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm25919-201ENSMUST00000104271 132 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm14870-201ENSMUST00000118414 156 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm11869-201ENSMUST00000118701 329 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm15621-201ENSMUST00000119162 364 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Defa-ps12-201ENSMUST00000122353 193 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm20612-201ENSMUST00000176318 236 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm8192-201ENSMUST00000182196 958 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm7745-201ENSMUST00000182235 973 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm8367-201ENSMUST00000186145 887 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm18553-201ENSMUST00000194152 634 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm36448-201ENSMUST00000199916 438 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm5886-202ENSMUST00000203957 522 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm7333-201ENSMUST00000213449 1060 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm18225-201ENSMUST00000216708 742 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm18774-201ENSMUST00000218269 601 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 CR974485.1-201ENSMUST00000222408 402 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm7731-201ENSMUST00000091759 470 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm43843-201ENSMUST00000202396 1587 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.05□□□□□ -1.44
Nkx6-1Q99MA9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Nkx6-1Q99MA9 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms