Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm20926-201ENSMUST00000194457 696 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm19761-201ENSMUST00000205372 391 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm45185-201ENSMUST00000207556 404 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 AC102369.1-201ENSMUST00000218415 373 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm18592-201ENSMUST00000221529 276 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm9762-201ENSMUST00000036976 444 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm23970-201ENSMUST00000083319 107 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Mir298-201ENSMUST00000083476 82 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.88□□□□□ -1.31
Clp1Q99LI9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clp1Q99LI9 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm11898-201ENSMUST00000117161 385 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm13641-201ENSMUST00000117993 473 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm23995-201ENSMUST00000158060 129 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm19560-201ENSMUST00000177510 514 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm25065-201ENSMUST00000177914 132 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm25891-201ENSMUST00000180050 132 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm37725-201ENSMUST00000193965 2125 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm44726-201ENSMUST00000203427 217 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm19033-201ENSMUST00000208516 964 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm2996-201ENSMUST00000211398 537 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm45850-201ENSMUST00000212536 338 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm20786-201ENSMUST00000212649 436 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 AC124732.4-201ENSMUST00000220930 1274 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm9321-201ENSMUST00000221179 778 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Gm9292-201ENSMUST00000222008 710 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 AC109172.2-201ENSMUST00000228792 381 ntBASIC6.87□□□□□ -1.31
Clp1Q99LI9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.87□□□□□ -1.31
Clp1Q99LI9 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms