Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox18P43680 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm13772-201ENSMUST00000118431 317 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm13222-201ENSMUST00000119638 138 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm14736-201ENSMUST00000121470 336 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm17081-201ENSMUST00000167363 478 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm35876-201ENSMUST00000205044 459 ntBASIC6.87□□□□□ -1.31
Sox18P43680 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm45590-201ENSMUST00000209715 262 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.87□□□□□ -1.31
Sox18P43680 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox18P43680 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm9309-201ENSMUST00000223537 546 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox18P43680 AC115289.1-201ENSMUST00000224915 522 ntBASIC6.87□□□□□ -1.31
Sox18P43680 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.87□□□□□ -1.31
Sox18P43680 CT025689.4-201ENSMUST00000225926 601 ntBASIC6.87□□□□□ -1.31
Sox18P43680 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Gm15732-201ENSMUST00000079794 480 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox18P43680 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.87□□□□□ -1.31
Sox18P43680 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Sox18P43680 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.87□□□□□ -1.31
Sox18P43680 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Sox18P43680 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox18P43680 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox18P43680 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm42680-201ENSMUST00000196238 2500 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Gm22774-201ENSMUST00000102084 109 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox18P43680 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox18P43680 Gm27579-201ENSMUST00000158113 63 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm23016-201ENSMUST00000158431 62 ntBASIC6.86□□□□□ -1.31
Sox18P43680 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm3470-201ENSMUST00000160819 420 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm8292-201ENSMUST00000162574 396 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm17538-201ENSMUST00000168236 327 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm4152-201ENSMUST00000172675 259 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm9286-201ENSMUST00000173586 508 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox18P43680 Mir5617-201ENSMUST00000176786 57 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm6931-201ENSMUST00000183103 371 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Ighv12-2-201ENSMUST00000191949 362 ntBASIC6.86□□□□□ -1.31
Sox18P43680 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.86□□□□□ -1.31
Sox18P43680 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm42475-201ENSMUST00000201212 295 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm44858-201ENSMUST00000207360 154 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox18P43680 Gm45279-201ENSMUST00000210315 391 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm45628-201ENSMUST00000210849 274 ntBASIC6.86□□□□□ -1.31
Sox18P43680 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms