Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col2a1P28481 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col2a1P28481 Gm25595-201ENSMUST00000102273 97 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.82□□□□□ -1.48
Col2a1P28481 Gm12131-201ENSMUST00000117479 359 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm7840-201ENSMUST00000122086 533 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm22343-201ENSMUST00000122648 286 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.82□□□□□ -1.48
Col2a1P28481 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm18100-201ENSMUST00000200897 452 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Ap3m1-208ENSMUST00000224016 764 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col2a1P28481 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.82□□□□□ -1.48
Col2a1P28481 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.82□□□□□ -1.48
Col2a1P28481 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col2a1P28481 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col2a1P28481 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col2a1P28481 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm11409-201ENSMUST00000118621 403 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col2a1P28481 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm16285-201ENSMUST00000162999 347 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm43309-201ENSMUST00000200837 458 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col2a1P28481 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.81□□□□□ -1.48
Col2a1P28481 Desi2-202ENSMUST00000069568 1193 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm26330-201ENSMUST00000082817 104 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 AC118639.1-203ENSMUST00000228425 2016 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.81□□□□□ -1.48
Col2a1P28481 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col2a1P28481 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col2a1P28481 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col2a1P28481 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Col2a1P28481 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm25096-201ENSMUST00000104043 129 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm24125-201ENSMUST00000104105 137 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm22020-201ENSMUST00000104358 136 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm8145-201ENSMUST00000118220 745 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.8□□□□□ -1.48
Col2a1P28481 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm45343-201ENSMUST00000210452 828 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm17999-201ENSMUST00000211568 542 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col2a1P28481 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col2a1P28481 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col2a1P28481 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col2a1P28481 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.79□□□□□ -1.48
Col2a1P28481 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col2a1P28481 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.79□□□□□ -1.48
Col2a1P28481 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col2a1P28481 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms