Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm8719-201ENSMUST00000203602 534 ntBASIC5.47□□□□□ -1.53
TnfP06804 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.47□□□□□ -1.53
TnfP06804 Gm5750-201ENSMUST00000218711 801 ntBASIC5.47□□□□□ -1.53
TnfP06804 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.47□□□□□ -1.53
TnfP06804 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.47□□□□□ -1.53
TnfP06804 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TnfP06804 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TnfP06804 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TnfP06804 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TnfP06804 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TnfP06804 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
TnfP06804 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TnfP06804 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TnfP06804 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TnfP06804 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
TnfP06804 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TnfP06804 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.46□□□□□ -1.54
TnfP06804 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TnfP06804 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.46□□□□□ -1.54
TnfP06804 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.46□□□□□ -1.54
TnfP06804 Gm23534-201ENSMUST00000157539 97 ntBASIC5.46□□□□□ -1.54
TnfP06804 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.46□□□□□ -1.54
TnfP06804 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.46□□□□□ -1.54
TnfP06804 Gm23799-201ENSMUST00000175559 120 ntBASIC5.46□□□□□ -1.54
TnfP06804 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.46□□□□□ -1.54
TnfP06804 Gm9512-201ENSMUST00000223112 497 ntBASIC5.46□□□□□ -1.54
TnfP06804 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.46□□□□□ -1.54
TnfP06804 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.46□□□□□ -1.54
TnfP06804 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TnfP06804 Mir17-201ENSMUST00000083574 84 ntBASIC5.46□□□□□ -1.54
TnfP06804 Gm23796-201ENSMUST00000084011 160 ntBASIC5.46□□□□□ -1.54
TnfP06804 AC131329.1-201ENSMUST00000221204 3487 ntBASIC5.46□□□□□ -1.54
TnfP06804 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
TnfP06804 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TnfP06804 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
TnfP06804 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.46□□□□□ -1.54
TnfP06804 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TnfP06804 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.45□□□□□ -1.54
TnfP06804 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.45□□□□□ -1.54
TnfP06804 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm16149-201ENSMUST00000117631 309 ntBASIC5.45□□□□□ -1.54
TnfP06804 Gm12444-201ENSMUST00000121512 877 ntBASIC5.45□□□□□ -1.54
TnfP06804 Gm12854-201ENSMUST00000128518 297 ntBASIC5.45□□□□□ -1.54
TnfP06804 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.45□□□□□ -1.54
TnfP06804 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm9457-201ENSMUST00000180176 372 ntBASIC5.45□□□□□ -1.54
TnfP06804 Gm27039-201ENSMUST00000182438 962 ntBASIC5.45□□□□□ -1.54
TnfP06804 Gm27688-201ENSMUST00000183634 91 ntBASIC5.45□□□□□ -1.54
TnfP06804 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.45□□□□□ -1.54
TnfP06804 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
TnfP06804 Supt4b-201ENSMUST00000214434 351 ntBASIC5.45□□□□□ -1.54
TnfP06804 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm7665-201ENSMUST00000076710 297 ntBASIC5.45□□□□□ -1.54
TnfP06804 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
TnfP06804 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TnfP06804 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
TnfP06804 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.45□□□□□ -1.54
TnfP06804 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.45□□□□□ -1.54
TnfP06804 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TnfP06804 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TnfP06804 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.45□□□□□ -1.54
TnfP06804 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TnfP06804 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.44□□□□□ -1.54
TnfP06804 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TnfP06804 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.44□□□□□ -1.54
TnfP06804 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.44□□□□□ -1.54
TnfP06804 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
TnfP06804 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms