Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
CiitaP79621 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Clec2j-201ENSMUST00000032517 515 ntBASIC5.88□□□□□ -1.47
CiitaP79621 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.88□□□□□ -1.47
CiitaP79621 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CiitaP79621 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.88□□□□□ -1.47
CiitaP79621 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CiitaP79621 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
CiitaP79621 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.88□□□□□ -1.47
CiitaP79621 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CiitaP79621 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
CiitaP79621 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm22266-201ENSMUST00000104011 138 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm9208-201ENSMUST00000120468 948 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm23467-201ENSMUST00000157127 159 ntBASIC5.87□□□□□ -1.47
CiitaP79621 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm37421-201ENSMUST00000193088 132 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Mir6516-201ENSMUST00000196236 110 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm18904-201ENSMUST00000218756 329 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.87□□□□□ -1.47
CiitaP79621 CT033778.1-201ENSMUST00000224767 767 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm6195-201ENSMUST00000063059 357 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Olfr878-201ENSMUST00000086061 1065 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.87□□□□□ -1.47
CiitaP79621 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.87□□□□□ -1.47
CiitaP79621 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
CiitaP79621 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CiitaP79621 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CiitaP79621 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CiitaP79621 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CiitaP79621 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm17044-201ENSMUST00000168549 828 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm4831-201ENSMUST00000174626 594 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm21756-201ENSMUST00000178380 930 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm21405-201ENSMUST00000179024 930 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.86□□□□□ -1.47
CiitaP79621 Gm21191-201ENSMUST00000186484 930 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm28061-201ENSMUST00000189085 807 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CiitaP79621 Gm29503-201ENSMUST00000191044 930 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm18007-201ENSMUST00000205019 844 ntBASIC5.86□□□□□ -1.47
CiitaP79621 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms